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#pragma section-numbers 2

R Packages

1. From CRAN

Install these packages from CRAN. Always check the "install dependencies" box.

  • DPpackage
  • ggplot2
  • gsubfn
  • hexbin
  • languageR
  • lme4
  • MCMCglmm
  • multcomp
  • plyr
  • reshape

2. From Bioconductor

When you install those packages you will get this warning: Warning: dependencies ‘marray’, ‘affy’, ‘Biobase’, ‘Rgraphviz’, ‘’ are not available. To fix it, install the standard packages from [http://www.bioconductor.org/docs/install/ Bioconductor] by doing the following at the R prompt:

source("http://bioconductor.org/biocLite.R")
biocLite(lib='/Library/Frameworks/R.framework/Resources/library/')

adjusting lib as appropriate for your OS. The example above is for Mac OS X.

Rpackages (last edited 2017-05-02 14:41:12 by dhcp-10-5-7-149)

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